Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SMC65236.1 | SMD05944.1 | SAMN05660733_00768 | SAMN05660733_03713 | Cytochrome c biogenesis protein. | Glutaredoxin-like domain. | 0.454 |
SMC65236.1 | SMD22332.1 | SAMN05660733_00768 | SAMN05660733_06762 | Cytochrome c biogenesis protein. | PhoH-like ATPase. | 0.508 |
SMD05944.1 | SMC65236.1 | SAMN05660733_03713 | SAMN05660733_00768 | Glutaredoxin-like domain. | Cytochrome c biogenesis protein. | 0.454 |
SMD05944.1 | SMD22332.1 | SAMN05660733_03713 | SAMN05660733_06762 | Glutaredoxin-like domain. | PhoH-like ATPase. | 0.406 |
SMD06721.1 | SMD07951.1 | SAMN05660733_03819 | SAMN05660733_03954 | Putative TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | Glycolate oxidase. | 0.426 |
SMD06721.1 | SMD22332.1 | SAMN05660733_03819 | SAMN05660733_06762 | Putative TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | PhoH-like ATPase. | 0.541 |
SMD07951.1 | SMD06721.1 | SAMN05660733_03954 | SAMN05660733_03819 | Glycolate oxidase. | Putative TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | 0.426 |
SMD07951.1 | SMD22332.1 | SAMN05660733_03954 | SAMN05660733_06762 | Glycolate oxidase. | PhoH-like ATPase. | 0.426 |
SMD22332.1 | SMC65236.1 | SAMN05660733_06762 | SAMN05660733_00768 | PhoH-like ATPase. | Cytochrome c biogenesis protein. | 0.508 |
SMD22332.1 | SMD05944.1 | SAMN05660733_06762 | SAMN05660733_03713 | PhoH-like ATPase. | Glutaredoxin-like domain. | 0.406 |
SMD22332.1 | SMD06721.1 | SAMN05660733_06762 | SAMN05660733_03819 | PhoH-like ATPase. | Putative TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | 0.541 |
SMD22332.1 | SMD07951.1 | SAMN05660733_06762 | SAMN05660733_03954 | PhoH-like ATPase. | Glycolate oxidase. | 0.426 |
SMD22332.1 | SMD22670.1 | SAMN05660733_06762 | SAMN05660733_06912 | PhoH-like ATPase. | Protein of unknown function. | 0.427 |
SMD22332.1 | SMD23959.1 | SAMN05660733_06762 | SAMN05660733_07490 | PhoH-like ATPase. | Homoserine dehydrogenase. | 0.467 |
SMD22332.1 | SMD24133.1 | SAMN05660733_06762 | SAMN05660733_07606 | PhoH-like ATPase. | Ribonuclease E. | 0.503 |
SMD22332.1 | rbpA-2 | SAMN05660733_06762 | SAMN05660733_07173 | PhoH-like ATPase. | RNA polymerase-binding protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. | 0.478 |
SMD22670.1 | SMD22332.1 | SAMN05660733_06912 | SAMN05660733_06762 | Protein of unknown function. | PhoH-like ATPase. | 0.427 |
SMD23959.1 | SMD22332.1 | SAMN05660733_07490 | SAMN05660733_06762 | Homoserine dehydrogenase. | PhoH-like ATPase. | 0.467 |
SMD24133.1 | SMD22332.1 | SAMN05660733_07606 | SAMN05660733_06762 | Ribonuclease E. | PhoH-like ATPase. | 0.503 |
rbpA-2 | SMD22332.1 | SAMN05660733_07173 | SAMN05660733_06762 | RNA polymerase-binding protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. | PhoH-like ATPase. | 0.478 |