STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMD22721.13-amino-4-hydroxybenzoic acid synthase. (356 aa)    
Predicted Functional Partners:
SMD22718.1
2-amino-4, 5-dihydroxy-6-oxo-7-(phosphonooxy)heptanoate synthase.
 
 
 0.988
SMD22722.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
 
     0.837
SMD21508.1
Prephenate dehydratase.
  
  
 0.814
SMD07026.1
Hypothetical protein.
  
 
 0.804
SMD22723.1
Helix-turn-helix domain-containing protein.
       0.708
SMD20439.1
Shikimate dehydrogenase; Belongs to the shikimate dehydrogenase family.
    
 0.665
SMC88835.1
Thaumatin family protein.
  
     0.618
SMD12411.1
Para-aminobenzoate synthetase.
 
   
 0.613
SMC67186.1
Chorismate mutase.
  
  
 0.585
SMD20867.1
Chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate.
  
  
 0.585
Your Current Organism:
Lentzea albidocapillata
NCBI taxonomy Id: 40571
Other names: ATCC 51859, CCUG 48294, CIP 104842, DSM 44073, IFO 15855, IMMIB D-958, IMSNU 21253, JCM 9732, L. albidocapillata, Lentzea albidicapillata, NBRC 100372, NBRC 15855, NRRL B-24057, Saccharothrix albidicapillata, Saccharothrix albidocapillata
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