STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMD23770.1Oligopeptide transport system permease protein. (309 aa)    
Predicted Functional Partners:
SMD23771.1
Oligopeptide transport system permease protein.
 
 0.993
SMD23773.1
Oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  0.988
SMD23772.1
Oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
  0.987
SMD23769.1
Oligopeptide transport system substrate-binding protein.
 
 
 0.984
SMC77367.1
Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain-containing protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.978
SMD22275.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.972
SMC96216.1
Oligopeptide transport system ATP-binding protein.
 
 0.971
SMC50418.1
Oligopeptide transport system substrate-binding protein.
 
 
 0.969
SMD21370.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  0.967
SMC92111.1
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.964
Your Current Organism:
Lentzea albidocapillata
NCBI taxonomy Id: 40571
Other names: ATCC 51859, CCUG 48294, CIP 104842, DSM 44073, IFO 15855, IMMIB D-958, IMSNU 21253, JCM 9732, L. albidocapillata, Lentzea albidicapillata, NBRC 100372, NBRC 15855, NRRL B-24057, Saccharothrix albidicapillata, Saccharothrix albidocapillata
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