STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMD25573.1FAD-linked oxidoreductase. (426 aa)    
Predicted Functional Partners:
SMD25574.1
D-serine deaminase, pyridoxal phosphate-dependent.
 
    0.905
SMC91559.1
NADH-quinone oxidoreductase subunit F.
   
   0.838
xylA
Xylose isomerase; Belongs to the xylose isomerase family.
    
  0.809
SMD12670.1
Glutamate synthase (NADPH/NADH) large chain.
    
 0.809
SMC92310.1
Beta-galactosidase.
    
  0.789
SMC65932.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
 0.704
SMC48324.1
Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family.
    
  0.700
SMD19226.1
FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase.
  
 0.644
SMD01667.1
Electron transfer flavoprotein alpha subunit.
  
 
 0.624
SMD01660.1
Electron transfer flavoprotein beta subunit.
  
 
 0.623
Your Current Organism:
Lentzea albidocapillata
NCBI taxonomy Id: 40571
Other names: ATCC 51859, CCUG 48294, CIP 104842, DSM 44073, IFO 15855, IMMIB D-958, IMSNU 21253, JCM 9732, L. albidocapillata, Lentzea albidicapillata, NBRC 100372, NBRC 15855, NRRL B-24057, Saccharothrix albidicapillata, Saccharothrix albidocapillata
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