Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SMD22460.1 | SMD25577.1 | SAMN05660733_06838 | SAMN05660733_08217 | Calcineurin-like phosphoesterase. | Uncharacterised MFS-type transporter YbfB. | 0.518 |
SMD24257.1 | SMD25577.1 | SAMN05660733_07700 | SAMN05660733_08217 | Acetyltransferase (GNAT) family protein. | Uncharacterised MFS-type transporter YbfB. | 0.443 |
SMD25575.1 | SMD25576.1 | SAMN05660733_08215 | SAMN05660733_08216 | Transcriptional regulator, TetR family. | Beta-glucosidase. | 0.545 |
SMD25575.1 | SMD25577.1 | SAMN05660733_08215 | SAMN05660733_08217 | Transcriptional regulator, TetR family. | Uncharacterised MFS-type transporter YbfB. | 0.545 |
SMD25575.1 | SMD25578.1 | SAMN05660733_08215 | SAMN05660733_08218 | Transcriptional regulator, TetR family. | Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.545 |
SMD25576.1 | SMD25575.1 | SAMN05660733_08216 | SAMN05660733_08215 | Beta-glucosidase. | Transcriptional regulator, TetR family. | 0.545 |
SMD25576.1 | SMD25577.1 | SAMN05660733_08216 | SAMN05660733_08217 | Beta-glucosidase. | Uncharacterised MFS-type transporter YbfB. | 0.793 |
SMD25576.1 | SMD25578.1 | SAMN05660733_08216 | SAMN05660733_08218 | Beta-glucosidase. | Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.787 |
SMD25577.1 | SMD22460.1 | SAMN05660733_08217 | SAMN05660733_06838 | Uncharacterised MFS-type transporter YbfB. | Calcineurin-like phosphoesterase. | 0.518 |
SMD25577.1 | SMD24257.1 | SAMN05660733_08217 | SAMN05660733_07700 | Uncharacterised MFS-type transporter YbfB. | Acetyltransferase (GNAT) family protein. | 0.443 |
SMD25577.1 | SMD25575.1 | SAMN05660733_08217 | SAMN05660733_08215 | Uncharacterised MFS-type transporter YbfB. | Transcriptional regulator, TetR family. | 0.545 |
SMD25577.1 | SMD25576.1 | SAMN05660733_08217 | SAMN05660733_08216 | Uncharacterised MFS-type transporter YbfB. | Beta-glucosidase. | 0.793 |
SMD25577.1 | SMD25578.1 | SAMN05660733_08217 | SAMN05660733_08218 | Uncharacterised MFS-type transporter YbfB. | Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.789 |
SMD25578.1 | SMD25575.1 | SAMN05660733_08218 | SAMN05660733_08215 | Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Transcriptional regulator, TetR family. | 0.545 |
SMD25578.1 | SMD25576.1 | SAMN05660733_08218 | SAMN05660733_08216 | Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Beta-glucosidase. | 0.787 |
SMD25578.1 | SMD25577.1 | SAMN05660733_08218 | SAMN05660733_08217 | Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Uncharacterised MFS-type transporter YbfB. | 0.789 |