Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| OTA16027.1 | OTA18749.1 | Xbed_03534 | Xbed_02997 | Amino acid ABC transporter ATP-binding protein PEB1. | Amino acid ABC transporter ATP-binding protein PEB1. | 0.601 |
| OTA16027.1 | OTA21311.1 | Xbed_03534 | Xbed_00540 | Amino acid ABC transporter ATP-binding protein PEB1. | Hypothetical protein. | 0.769 |
| OTA18749.1 | OTA16027.1 | Xbed_02997 | Xbed_03534 | Amino acid ABC transporter ATP-binding protein PEB1. | Amino acid ABC transporter ATP-binding protein PEB1. | 0.601 |
| OTA18749.1 | OTA21311.1 | Xbed_02997 | Xbed_00540 | Amino acid ABC transporter ATP-binding protein PEB1. | Hypothetical protein. | 0.797 |
| OTA21310.1 | OTA21311.1 | Xbed_00539 | Xbed_00540 | Hypothetical protein. | Hypothetical protein. | 0.957 |
| OTA21310.1 | atpD | Xbed_00539 | Xbed_02756 | Hypothetical protein. | Type III secretion system ATPase VscN; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | 0.405 |
| OTA21310.1 | msbA | Xbed_00539 | Xbed_00416 | Hypothetical protein. | Fused lipid transporter subunits of ABC superfamily: membrane component/ATP-binding component; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.683 |
| OTA21311.1 | OTA16027.1 | Xbed_00540 | Xbed_03534 | Hypothetical protein. | Amino acid ABC transporter ATP-binding protein PEB1. | 0.769 |
| OTA21311.1 | OTA18749.1 | Xbed_00540 | Xbed_02997 | Hypothetical protein. | Amino acid ABC transporter ATP-binding protein PEB1. | 0.797 |
| OTA21311.1 | OTA21310.1 | Xbed_00540 | Xbed_00539 | Hypothetical protein. | Hypothetical protein. | 0.957 |
| OTA21311.1 | atpA | Xbed_00540 | Xbed_02758 | Hypothetical protein. | F0F1 ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 0.752 |
| OTA21311.1 | atpC | Xbed_00540 | Xbed_02755 | Hypothetical protein. | F0F1 ATP synthase subunit epsilon; Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.707 |
| OTA21311.1 | atpD | Xbed_00540 | Xbed_02756 | Hypothetical protein. | Type III secretion system ATPase VscN; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | 0.759 |
| OTA21311.1 | atpG | Xbed_00540 | Xbed_02757 | Hypothetical protein. | F0F1 ATP synthase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. | 0.728 |
| OTA21311.1 | metN | Xbed_00540 | Xbed_02030 | Hypothetical protein. | Amino acid ABC transporter ATP-binding protein PEB1; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | 0.871 |
| OTA21311.1 | msbA | Xbed_00540 | Xbed_00416 | Hypothetical protein. | Fused lipid transporter subunits of ABC superfamily: membrane component/ATP-binding component; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.757 |
| OTA21311.1 | pstB | Xbed_00540 | Xbed_01315 | Hypothetical protein. | Phosphate transporter ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. | 0.895 |
| atpA | OTA21311.1 | Xbed_02758 | Xbed_00540 | F0F1 ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | Hypothetical protein. | 0.752 |
| atpA | atpC | Xbed_02758 | Xbed_02755 | F0F1 ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | F0F1 ATP synthase subunit epsilon; Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.999 |
| atpA | atpD | Xbed_02758 | Xbed_02756 | F0F1 ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | Type III secretion system ATPase VscN; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | 0.999 |
page 1 of 2