Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OTA20642.1 | OTA20643.1 | Xbed_01170 | Xbed_01171 | Pentapeptide repeat-containing protein. | Pentapeptide repeat-containing protein. | 0.844 |
OTA20642.1 | OTA21348.1 | Xbed_01170 | Xbed_00577 | Pentapeptide repeat-containing protein. | Hypothetical protein. | 0.437 |
OTA20643.1 | OTA20642.1 | Xbed_01171 | Xbed_01170 | Pentapeptide repeat-containing protein. | Pentapeptide repeat-containing protein. | 0.844 |
OTA20643.1 | OTA21348.1 | Xbed_01171 | Xbed_00577 | Pentapeptide repeat-containing protein. | Hypothetical protein. | 0.437 |
OTA20694.1 | OTA21348.1 | Xbed_01226 | Xbed_00577 | Hypothetical protein. | Hypothetical protein. | 0.464 |
OTA21347.1 | OTA21348.1 | Xbed_00576 | Xbed_00577 | Hypothetical protein. | Hypothetical protein. | 0.773 |
OTA21347.1 | OTA21349.1 | Xbed_00576 | Xbed_00578 | Hypothetical protein. | Hypothetical protein. | 0.727 |
OTA21347.1 | OTA21350.1 | Xbed_00576 | Xbed_00579 | Hypothetical protein. | Rhs element Vgr family protein. | 0.727 |
OTA21347.1 | OTA21351.1 | Xbed_00576 | Xbed_00580 | Hypothetical protein. | Type VI secretion system protein VasA. | 0.712 |
OTA21348.1 | OTA20642.1 | Xbed_00577 | Xbed_01170 | Hypothetical protein. | Pentapeptide repeat-containing protein. | 0.437 |
OTA21348.1 | OTA20643.1 | Xbed_00577 | Xbed_01171 | Hypothetical protein. | Pentapeptide repeat-containing protein. | 0.437 |
OTA21348.1 | OTA20694.1 | Xbed_00577 | Xbed_01226 | Hypothetical protein. | Hypothetical protein. | 0.464 |
OTA21348.1 | OTA21347.1 | Xbed_00577 | Xbed_00576 | Hypothetical protein. | Hypothetical protein. | 0.773 |
OTA21348.1 | OTA21349.1 | Xbed_00577 | Xbed_00578 | Hypothetical protein. | Hypothetical protein. | 0.729 |
OTA21348.1 | OTA21350.1 | Xbed_00577 | Xbed_00579 | Hypothetical protein. | Rhs element Vgr family protein. | 0.727 |
OTA21348.1 | OTA21351.1 | Xbed_00577 | Xbed_00580 | Hypothetical protein. | Type VI secretion system protein VasA. | 0.712 |
OTA21348.1 | guaA | Xbed_00577 | Xbed_02861 | Hypothetical protein. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.784 |
OTA21348.1 | guaB | Xbed_00577 | Xbed_02862 | Hypothetical protein. | Inosine 5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.728 |
OTA21348.1 | nagZ | Xbed_00577 | Xbed_02177 | Hypothetical protein. | Beta-glucosidase; Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide- linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N- acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides. Belongs to the glycosyl hydrolase 3 family. NagZ subfamily. | 0.493 |
OTA21349.1 | OTA21347.1 | Xbed_00578 | Xbed_00576 | Hypothetical protein. | Hypothetical protein. | 0.727 |
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