Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OTA16209.1 | OTA20258.1 | Xbed_03510 | Xbed_01733 | Glutamine synthetase. | Pyruvate carboxylase. | 0.487 |
OTA16209.1 | OTA20259.1 | Xbed_03510 | Xbed_01734 | Glutamine synthetase. | Putative multifunctional urea amidolyase. | 0.833 |
OTA16209.1 | OTA21067.1 | Xbed_03510 | Xbed_00713 | Glutamine synthetase. | Bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family. | 0.835 |
OTA16209.1 | pxpA | Xbed_03510 | Xbed_01735 | Glutamine synthetase. | Hypothetical protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. | 0.576 |
OTA18991.1 | OTA20258.1 | Xbed_02831 | Xbed_01733 | Hypothetical protein. | Pyruvate carboxylase. | 0.586 |
OTA18991.1 | OTA20259.1 | Xbed_02831 | Xbed_01734 | Hypothetical protein. | Putative multifunctional urea amidolyase. | 0.994 |
OTA18991.1 | gltA | Xbed_02831 | Xbed_00247 | Hypothetical protein. | Citrate Si-synthase; Belongs to the citrate synthase family. | 0.406 |
OTA18991.1 | pxpA | Xbed_02831 | Xbed_01735 | Hypothetical protein. | Hypothetical protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. | 0.532 |
OTA20258.1 | OTA16209.1 | Xbed_01733 | Xbed_03510 | Pyruvate carboxylase. | Glutamine synthetase. | 0.487 |
OTA20258.1 | OTA18991.1 | Xbed_01733 | Xbed_02831 | Pyruvate carboxylase. | Hypothetical protein. | 0.586 |
OTA20258.1 | OTA20259.1 | Xbed_01733 | Xbed_01734 | Pyruvate carboxylase. | Putative multifunctional urea amidolyase. | 0.973 |
OTA20258.1 | gltA | Xbed_01733 | Xbed_00247 | Pyruvate carboxylase. | Citrate Si-synthase; Belongs to the citrate synthase family. | 0.656 |
OTA20258.1 | pxpA | Xbed_01733 | Xbed_01735 | Pyruvate carboxylase. | Hypothetical protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. | 0.605 |
OTA20259.1 | OTA16209.1 | Xbed_01734 | Xbed_03510 | Putative multifunctional urea amidolyase. | Glutamine synthetase. | 0.833 |
OTA20259.1 | OTA18991.1 | Xbed_01734 | Xbed_02831 | Putative multifunctional urea amidolyase. | Hypothetical protein. | 0.994 |
OTA20259.1 | OTA20258.1 | Xbed_01734 | Xbed_01733 | Putative multifunctional urea amidolyase. | Pyruvate carboxylase. | 0.973 |
OTA20259.1 | OTA20839.1 | Xbed_01734 | Xbed_01092 | Putative multifunctional urea amidolyase. | Gamma-glutamylcyclotransferase. | 0.747 |
OTA20259.1 | OTA21066.1 | Xbed_01734 | Xbed_00712 | Putative multifunctional urea amidolyase. | Sodium/proline symporter; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.598 |
OTA20259.1 | OTA21067.1 | Xbed_01734 | Xbed_00713 | Putative multifunctional urea amidolyase. | Bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family. | 0.790 |
OTA20259.1 | OTA21363.1 | Xbed_01734 | Xbed_00592 | Putative multifunctional urea amidolyase. | Membrane protein. | 0.415 |
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