STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OTA19366.1Leucyl aminopeptidase; Probably plays an important role in intracellular peptide degradation. (431 aa)    
Predicted Functional Partners:
OTA19365.1
Enhances serine sensitivity.
  
    0.758
OTA19367.1
Fe-S assembly protein IscX.
  
    0.732
hscA
Molecular chaperone DnaK; Chaperone involved in the maturation of iron-sulfur cluster- containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB. Involved in the maturation of IscU.
  
 
 0.673
gshB
Glutathione synthetase; Belongs to the prokaryotic GSH synthase family.
   
 
 0.667
OTA21684.1
Aminopeptidase N.
   
 0.666
pepA
Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
  
  
 
0.666
OTA21380.1
Gamma-glutamyltransferase.
     
 0.628
OTA19368.1
Ferredoxin, 2Fe-2S type, ISC system.
  
    0.627
OTA20987.1
Aminoacyl-histidine dipeptidase.
   
 
 0.622
OTA21680.1
Aromatic amino acid aminotransferase.
    
 0.618
Your Current Organism:
Xenorhabdus beddingii
NCBI taxonomy Id: 40578
Other names: ATCC 49542, DSM 4764, UQM 2871, X. beddingii, Xenorhabdus nematophila subsp. beddingi, Xenorhabdus nematophilus subsp. beddingii, strain Q58, strain Q58/1
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