node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OTA18759.1 | mrdA | Xbed_03007 | Xbed_03004 | D-alanyl-D-alanine endopeptidase; Belongs to the peptidase S11 family. | Hypothetical protein; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily. | 0.799 |
OTA18759.1 | mrdB | Xbed_03007 | Xbed_03005 | D-alanyl-D-alanine endopeptidase; Belongs to the peptidase S11 family. | Cell wall shape-determining protein; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily. | 0.773 |
OTA18759.1 | rlmH | Xbed_03007 | Xbed_03003 | D-alanyl-D-alanine endopeptidase; Belongs to the peptidase S11 family. | 23S rRNA -N-methyltransferase RlmH; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family. | 0.546 |
OTA18759.1 | rlpA | Xbed_03007 | Xbed_03006 | D-alanyl-D-alanine endopeptidase; Belongs to the peptidase S11 family. | Rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. | 0.461 |
holA | lptE | Xbed_03000 | Xbed_02999 | DNA polymerase III subunit delta. | LPS biosynthesis protein; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane. | 0.855 |
holA | mrdA | Xbed_03000 | Xbed_03004 | DNA polymerase III subunit delta. | Hypothetical protein; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily. | 0.466 |
holA | mrdB | Xbed_03000 | Xbed_03005 | DNA polymerase III subunit delta. | Cell wall shape-determining protein; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily. | 0.456 |
holA | nadD | Xbed_03000 | Xbed_03001 | DNA polymerase III subunit delta. | Nicotinate-nicotinamide nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.821 |
holA | rlmH | Xbed_03000 | Xbed_03003 | DNA polymerase III subunit delta. | 23S rRNA -N-methyltransferase RlmH; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family. | 0.510 |
holA | rlpA | Xbed_03000 | Xbed_03006 | DNA polymerase III subunit delta. | Rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. | 0.447 |
holA | rsfS | Xbed_03000 | Xbed_03002 | DNA polymerase III subunit delta. | Hypothetical protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation. | 0.573 |
lptE | holA | Xbed_02999 | Xbed_03000 | LPS biosynthesis protein; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane. | DNA polymerase III subunit delta. | 0.855 |
lptE | mrdA | Xbed_02999 | Xbed_03004 | LPS biosynthesis protein; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane. | Hypothetical protein; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily. | 0.527 |
lptE | mrdB | Xbed_02999 | Xbed_03005 | LPS biosynthesis protein; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane. | Cell wall shape-determining protein; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily. | 0.456 |
lptE | nadD | Xbed_02999 | Xbed_03001 | LPS biosynthesis protein; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane. | Nicotinate-nicotinamide nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.825 |
lptE | rlmH | Xbed_02999 | Xbed_03003 | LPS biosynthesis protein; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane. | 23S rRNA -N-methyltransferase RlmH; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family. | 0.510 |
lptE | rlpA | Xbed_02999 | Xbed_03006 | LPS biosynthesis protein; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane. | Rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. | 0.500 |
lptE | rsfS | Xbed_02999 | Xbed_03002 | LPS biosynthesis protein; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane. | Hypothetical protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation. | 0.573 |
mrdA | OTA18759.1 | Xbed_03004 | Xbed_03007 | Hypothetical protein; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily. | D-alanyl-D-alanine endopeptidase; Belongs to the peptidase S11 family. | 0.799 |
mrdA | holA | Xbed_03004 | Xbed_03000 | Hypothetical protein; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily. | DNA polymerase III subunit delta. | 0.466 |