STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OTA18146.1Integrase; Belongs to the 'phage' integrase family. (411 aa)    
Predicted Functional Partners:
OTA16984.1
Integrase.
  
     0.773
OTA16991.1
Integrase.
  
     0.773
OTA16992.1
Integrase; Belongs to the 'phage' integrase family.
  
     0.772
OTA21034.1
Integrase.
  
     0.759
OTA16983.1
Integrase; Belongs to the 'phage' integrase family.
  
     0.673
OTA18174.1
AlpA family phage regulatory protein.
  
    0.511
OTA21726.1
DNA primase.
 
     0.483
OTA15007.1
Dipicolinate synthase.
  
    0.415
Your Current Organism:
Xenorhabdus beddingii
NCBI taxonomy Id: 40578
Other names: ATCC 49542, DSM 4764, UQM 2871, X. beddingii, Xenorhabdus nematophila subsp. beddingi, Xenorhabdus nematophilus subsp. beddingii, strain Q58, strain Q58/1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.