STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OTA17194.1Hypothetical protein; Phage gene. (89 aa)    
Predicted Functional Partners:
OTA17195.1
Hypothetical protein.
       0.545
OTA17196.1
Phage-like protein.
       0.545
OTA17197.1
Holin.
       0.540
OTA17198.1
Tail protein.
       0.529
OTA17199.1
Phage tail protein.
       0.529
OTA17200.1
Hypothetical protein; Phage gene.
       0.499
OTA17202.1
Head completion protein.
       0.499
OTA17201.1
Phage tail protein.
       0.490
OTA17190.1
Protein phage.
       0.467
OTA17191.1
Phage protein.
       0.467
Your Current Organism:
Xenorhabdus beddingii
NCBI taxonomy Id: 40578
Other names: ATCC 49542, DSM 4764, UQM 2871, X. beddingii, Xenorhabdus nematophila subsp. beddingi, Xenorhabdus nematophilus subsp. beddingii, strain Q58, strain Q58/1
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.