Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
mdtBmdtB encodes multidrug efflux system, subunit B; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. MdtB subfamily. (1054 aa)    
Predicted Functional Partners:
mdtA
Multidrug efflux system, subunit A; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.995
OTA21303.1
Acriflavine resistance protein A; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.935
OTA16758.1
HlyD family secretion protein.
 
 0.858
mdtC
mdtC encodes multidrug efflux system, subunit C; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. MdtC subfamily.
 
    
0.853
OTA21633.1
Periplasmic protein of efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.847
OTA16334.1
baeS encodes sensory histidine kinase in two-component regulatory system with BaeR.
  
  
 0.789
OTA19882.1
Hypothetical protein.
  
 0.696
OTA19773.1
ABC transporter permease.
  
 0.696
OTA16757.1
Membrane protein.
  
 0.622
OTA16335.1
baeR encodes response regulator in two-component regulatory system with BaeS.
     
 0.622
Your Current Organism:
Xenorhabdus beddingii
NCBI taxonomy Id: 40578
Other names: ATCC 49542, DSM 4764, UQM 2871, X. beddingii, Xenorhabdus nematophila subsp. beddingi, Xenorhabdus nematophilus subsp. beddingii, strain Q58, strain Q58/1
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