STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPH72459.1Cell wall hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (146 aa)    
Predicted Functional Partners:
KPH71700.1
Spore gernimation protein GerQ; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.824
KPH73325.1
Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.765
KPH75639.1
Sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.757
KPH77084.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.710
sspI
Small acid-soluble spore protein SspI; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SspI family.
  
     0.710
KPH76038.1
ATP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.702
KPH77191.1
RsfA family transcription regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.701
KPH78787.1
Peptidase M23; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.673
KPH76761.1
Spore protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.645
KPH69344.1
Sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.637
Your Current Organism:
Oceanobacillus caeni
NCBI taxonomy Id: 405946
Other names: CCUG 53534, CIP 109363, KCTC 13061, O. caeni, Oceanobacillus caeni Nam et al. 2008, Oceanobacillus sp. MN1SW8a, Oceanobacillus sp. S-11, strain S-11
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.