STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPH71546.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (71 aa)    
Predicted Functional Partners:
recR
Recombinase RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.
  
    0.634
KPH71543.1
Lysine decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.560
KPH72455.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.540
KPH71545.1
Pro-sigma K processing regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.518
KPH76741.1
Malate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.509
KPH71135.1
Von Willebrand factor A; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.500
KPH76025.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.476
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
    
 0.473
KPH73965.1
Arginine decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.454
KPH73221.1
DNA polymerase III subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.415
Your Current Organism:
Oceanobacillus caeni
NCBI taxonomy Id: 405946
Other names: CCUG 53534, CIP 109363, KCTC 13061, O. caeni, Oceanobacillus caeni Nam et al. 2008, Oceanobacillus sp. MN1SW8a, Oceanobacillus sp. S-11, strain S-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.