STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
intIntegrase (recombinase); Belongs to the 'phage' integrase family. (439 aa)    
Predicted Functional Partners:
SACE_7031
Hypothetical protein.
 
   
 0.771
SACE_0466
Hypothetical protein.
 
   
 0.741
SACE_0241
Hypothetical protein.
 
   
 0.736
SACE_7030
Possible phiRv2 prophage protein.
 
     0.551
SACE_2306
Recombinase.
 
  
 0.451
SACE_1423
ATP-dependent DNA helicase, RecQ family.
  
  
 0.442
SACE_5125
Integrase.
  
   
 0.440
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
    0.436
SACE_7028
Hypothetical protein.
 
     0.435
SACE_1129
Hypothetical protein.
  
   
 0.428
Your Current Organism:
Saccharopolyspora erythraea
NCBI taxonomy Id: 405948
Other names: S. erythraea NRRL 2338, Saccharopolyspora erythraea ATCC 11635, Saccharopolyspora erythraea DSM 40517, Saccharopolyspora erythraea JCM 4748, Saccharopolyspora erythraea NRRL 2338, Saccharopolyspora erythraea str. NRRL 2338, Saccharopolyspora erythraea strain NRRL 2338
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.