close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SACE_0260Oligopeptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. (330 aa)    
Predicted Functional Partners:
appCC
Oligopeptide ABC transporter (permease).
  
 0.977
SACE_5788
Putative binding-protein-dependent integral membrane transport protein.
  
 0.969
SACE_1276
Oligopeptide/dipeptide ABC transporter, permease protein.
  
 0.968
SACE_2195
Putative peptide transport permease.
  
 0.965
SACE_0258
Oligopeptide/dipeptide ABC transporter, permease protein.
 
 
 0.960
SACE_4552
Binding-protein-dependent transport systems membrane component.
  
 0.960
SACE_2668
Putative transport system permease protein.
 
 
 0.932
dppC-1
Dipeptide transport system permease protein.
  
 0.919
oppB
Oligopeptide ABC transporter, permease.
  
 0.901
SACE_0846
ABC peptide transporter, permease component.
  
 0.882
Your Current Organism:
Saccharopolyspora erythraea
NCBI taxonomy Id: 405948
Other names: S. erythraea NRRL 2338, Saccharopolyspora erythraea ATCC 11635, Saccharopolyspora erythraea DSM 40517, Saccharopolyspora erythraea JCM 4748, Saccharopolyspora erythraea NRRL 2338, Saccharopolyspora erythraea str. NRRL 2338, Saccharopolyspora erythraea strain NRRL 2338
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.