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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
minD2Septum site determining protein. (386 aa)    
Predicted Functional Partners:
SACE_0368
Type II secretion system protein.
 
     0.905
SACE_0367
Type II secretion system protein E.
     
 0.809
SACE_0770
Hypothetical protein.
 
   
 0.742
SACE_0369
Type II secretion system protein.
 
     0.695
SACE_4915
Hypothetical protein.
  
 
 0.652
parB
Chromosome partitioning; Belongs to the ParB family.
  
 
 0.652
SACE_6278
Secreted protein.
  
     0.576
SACE_7355
Possible membrane protein.
  
     0.547
SACE_7379
Possible glycoprotein.
  
     0.534
SACE_0365
HAD-superfamily subfamily IB, PSPase-like protein.
     
 0.524
Your Current Organism:
Saccharopolyspora erythraea
NCBI taxonomy Id: 405948
Other names: S. erythraea NRRL 2338, Saccharopolyspora erythraea ATCC 11635, Saccharopolyspora erythraea DSM 40517, Saccharopolyspora erythraea JCM 4748, Saccharopolyspora erythraea NRRL 2338, Saccharopolyspora erythraea str. NRRL 2338, Saccharopolyspora erythraea strain NRRL 2338
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.