STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
minD2Septum site determining protein. (386 aa)    
Predicted Functional Partners:
SACE_0368
Type II secretion system protein.
 
     0.891
SACE_0367
Type II secretion system protein E.
     
 0.765
SACE_0770
Hypothetical protein.
 
   
 0.736
SACE_0369
Type II secretion system protein.
 
     0.658
SACE_4915
Hypothetical protein.
  
 
 0.595
parB
Chromosome partitioning; Belongs to the ParB family.
  
 
 0.595
SACE_6278
Secreted protein.
  
     0.576
SACE_7355
Possible membrane protein.
  
     0.547
SACE_7379
Possible glycoprotein.
  
     0.534
SACE_7107
Hypothetical protein.
  
     0.506
Your Current Organism:
Saccharopolyspora erythraea
NCBI taxonomy Id: 405948
Other names: S. erythraea NRRL 2338, Saccharopolyspora erythraea ATCC 11635, Saccharopolyspora erythraea DSM 40517, Saccharopolyspora erythraea JCM 4748, Saccharopolyspora erythraea NRRL 2338, Saccharopolyspora erythraea str. NRRL 2338, Saccharopolyspora erythraea strain NRRL 2338
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.