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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SACE_0553Nitrate ABC transporter, ATP-binding protein,putative. (292 aa)    
Predicted Functional Partners:
SACE_0554
ABC transporter, permease component.
  
 0.973
SACE_0555
ABC transporter, permease component.
  
 0.950
SACE_0556
ABC-type nitrate/sulfonate/bicarbonate transport systems-like protein.
 
  
 0.927
SACE_4415
ABC transporter, permease component.
  
 0.850
SACE_4434
Taurine transport system permease protein TauC.
  
 0.842
SACE_4432
Aliphatic sulfonates-binding lipoprotein.
 
  
 0.722
SACE_4413
ABC sulfonate transporter, substrate binding component.
 
  
 0.660
SACE_1672
ABC sulfonate transport system, permease protein.
 
  
 0.602
SACE_1673
ABC transporter substrate-binding protein.
  
  
 0.545
SACE_0493
Hypothetical protein.
  
  
 0.511
Your Current Organism:
Saccharopolyspora erythraea
NCBI taxonomy Id: 405948
Other names: S. erythraea NRRL 2338, Saccharopolyspora erythraea ATCC 11635, Saccharopolyspora erythraea DSM 40517, Saccharopolyspora erythraea JCM 4748, Saccharopolyspora erythraea NRRL 2338, Saccharopolyspora erythraea str. NRRL 2338, Saccharopolyspora erythraea strain NRRL 2338
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.