Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
SACE_0672Conserved protein (PRC-barrel domain). (130 aa)    
Predicted Functional Partners:
katE
Catalase HPII; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
  
 0.606
SACE_0080
Possible glycine betaine/carnitine/choline binding protein precursor.
  
    0.568
SACE_6409
Putative ABC transport system substrate binding protein.
  
    0.568
SACE_6759
Hypothetical protein; Belongs to the anti-sigma-factor antagonist family.
  
    0.503
SACE_3753
Hypothetical protein; Belongs to the anti-sigma-factor antagonist family.
  
    0.462
SACE_5589
Hypothetical protein; Belongs to the anti-sigma-factor antagonist family.
  
    0.462
SACE_7134
Conserved protein (PRC-barrel domain).
  
  
 
0.443
SACE_0673
Lipase.
       0.436
SACE_2186
Hypothetical protein.
   
    0.434
SACE_5557
CsbD-like protein; Belongs to the UPF0337 (CsbD) family.
  
  
 0.429
Your Current Organism:
Saccharopolyspora erythraea
NCBI taxonomy Id: 405948
Other names: S. erythraea NRRL 2338, Saccharopolyspora erythraea ATCC 11635, Saccharopolyspora erythraea DSM 40517, Saccharopolyspora erythraea JCM 4748, Saccharopolyspora erythraea NRRL 2338, Saccharopolyspora erythraea str. NRRL 2338, Saccharopolyspora erythraea strain NRRL 2338
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