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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SACE_0672Conserved protein (PRC-barrel domain). (130 aa)    
Predicted Functional Partners:
katE
Catalase HPII; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
  
 0.623
SACE_0080
Possible glycine betaine/carnitine/choline binding protein precursor.
  
    0.534
SACE_6409
Putative ABC transport system substrate binding protein.
  
    0.534
SACE_6759
Hypothetical protein; Belongs to the anti-sigma-factor antagonist family.
  
    0.470
SACE_7134
Conserved protein (PRC-barrel domain).
  
  
 
0.443
SACE_0673
Lipase.
       0.439
SACE_3753
Hypothetical protein; Belongs to the anti-sigma-factor antagonist family.
  
    0.426
SACE_5589
Hypothetical protein; Belongs to the anti-sigma-factor antagonist family.
  
    0.426
SACE_5557
CsbD-like protein; Belongs to the UPF0337 (CsbD) family.
  
  
 0.424
SACE_1054
Hypothetical protein.
  
    0.420
Your Current Organism:
Saccharopolyspora erythraea
NCBI taxonomy Id: 405948
Other names: S. erythraea NRRL 2338, Saccharopolyspora erythraea ATCC 11635, Saccharopolyspora erythraea DSM 40517, Saccharopolyspora erythraea JCM 4748, Saccharopolyspora erythraea NRRL 2338, Saccharopolyspora erythraea str. NRRL 2338, Saccharopolyspora erythraea strain NRRL 2338
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.