Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SACE_0705PEP phosphonomutase. (266 aa)    
Predicted Functional Partners:
prpD2
2-methylcitrate dehydratase.
 
  
 0.754
SACE_1099
Hypothetical protein.
   
    0.683
mshD
Acetyltransferase; Catalyzes the transfer of acetyl from acetyl-CoA to desacetylmycothiol (Cys-GlcN-Ins) to form mycothiol.
   
    0.680
aceB,
Malate synthase A; Belongs to the malate synthase family.
   
 
 0.650
citA4
Citrate (Si) synthase; Belongs to the citrate synthase family.
  
 
 0.639
citA
Citrate synthase.
  
 
 0.639
gltA-2
Citrate synthase; Belongs to the citrate synthase family.
  
 
 0.639
poxB
Pyruvate dehydrogenase; Belongs to the TPP enzyme family.
  
  
 0.609
poxB-2
Pyruvate dehydrogenase; Belongs to the TPP enzyme family.
  
  
 0.609
SACE_0758
Carboxyvinyl-carboxyphosphonate phosphorylmutase.
  
     0.580
Your Current Organism:
Saccharopolyspora erythraea
NCBI taxonomy Id: 405948
Other names: S. erythraea NRRL 2338, Saccharopolyspora erythraea ATCC 11635, Saccharopolyspora erythraea DSM 40517, Saccharopolyspora erythraea JCM 4748, Saccharopolyspora erythraea NRRL 2338, Saccharopolyspora erythraea str. NRRL 2338, Saccharopolyspora erythraea strain NRRL 2338
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