Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
SACE_0791Glycosyl transferase, family 39. (501 aa)    
Predicted Functional Partners:
SACE_1438
DNA polymerase III delta subunit.
  
     0.738
SACE_1625
Hypothetical protein.
  
     0.734
SACE_6931
Possible cytochrome c biogenesis membrane protein.
  
     0.723
SACE_0311
Metallophosphoesterase.
  
     0.708
rbpA-2
Hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family.
  
     0.695
SACE_0006
Hypothetical protein; Zn-ribbon-containing, possibly RNA-binding protein.
  
     0.693
SACE_1793
Hypothetical protein.
  
     0.687
SACE_1835
Hypothetical protein.
  
     0.668
SACE_1099
Hypothetical protein.
  
     0.665
greA-2
Transcription elongation factor G.
  
     0.653
Your Current Organism:
Saccharopolyspora erythraea
NCBI taxonomy Id: 405948
Other names: S. erythraea NRRL 2338, Saccharopolyspora erythraea ATCC 11635, Saccharopolyspora erythraea DSM 40517, Saccharopolyspora erythraea JCM 4748, Saccharopolyspora erythraea NRRL 2338, Saccharopolyspora erythraea str. NRRL 2338, Saccharopolyspora erythraea strain NRRL 2338
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