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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SACE_0839Septum formation initiator. (176 aa)    
Predicted Functional Partners:
ftsQ
Cell division protein; Essential cell division protein.
 
 
 
 0.897
SACE_0840
Protein of unknown function DUF501.
 
     0.887
eno
Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
  
    0.879
SACE_0842
Hypothetical protein; Membrane-bound lytic murein transglycosylase B.
 
     0.657
SACE_0836
Similar to membrane-bound lytic murein transglycosylase B.
 
     0.583
SACE_1202
Probable transcriptional regulatory protein.
  
     0.583
SACE_2338
Hypothetical protein; Membrane-bound lytic murein transglycosylase B.
 
     0.565
SACE_2472
Hypothetical protein; Membrane-bound lytic murein transglycosylase B.
 
     0.551
SACE_0835
Similar to membrane-bound lytic murein transglycosylase B.
 
     0.548
SACE_6458
Hypothetical protein.
 
    0.522
Your Current Organism:
Saccharopolyspora erythraea
NCBI taxonomy Id: 405948
Other names: S. erythraea NRRL 2338, Saccharopolyspora erythraea ATCC 11635, Saccharopolyspora erythraea DSM 40517, Saccharopolyspora erythraea JCM 4748, Saccharopolyspora erythraea NRRL 2338, Saccharopolyspora erythraea str. NRRL 2338, Saccharopolyspora erythraea strain NRRL 2338
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