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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xylBXylulose kinase. (477 aa)    
Predicted Functional Partners:
rpe
Putatibe ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
   
 0.918
SACE_0949
Carbohydrate kinase, FGGY; Belongs to the FGGY kinase family.
 
  
 
0.917
adh10
Zinc-binding dehydrogenase.
 
  
 0.823
SACE_0928
DeoR family transcriptional regulator of sugar metabolism.
  
  
 0.799
SACE_0924
Extracellular solute-binding protein, family 1.
 
     0.774
SACE_0925
Binding-protein-dependent transport systems membrane component.
  
  
 0.747
SACE_0926
Binding-protein-dependent transport systems membrane component.
  
    0.746
SACE_3935
Hypothetical protein.
  
  
 0.651
galK
Galactokinase; Belongs to the GHMP kinase family. GalK subfamily.
 
  
 0.561
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily.
  
 
 0.530
Your Current Organism:
Saccharopolyspora erythraea
NCBI taxonomy Id: 405948
Other names: S. erythraea NRRL 2338, Saccharopolyspora erythraea ATCC 11635, Saccharopolyspora erythraea DSM 40517, Saccharopolyspora erythraea JCM 4748, Saccharopolyspora erythraea NRRL 2338, Saccharopolyspora erythraea str. NRRL 2338, Saccharopolyspora erythraea strain NRRL 2338
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