Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
SACE_0943Binding protein/LacI transcriptional regulator. (334 aa)    
Predicted Functional Partners:
rbsA
Ribose transport ATP-binding protein.
 
 0.993
rbsC
Ribose ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.993
SACE_1881
ABC transporter protein, ATP binding component.
 
 0.980
SACE_1882
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.980
SACE_2988
ABC transporter integral membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.980
rbsA-2
ABC transporter protein, ATP binding component; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
 0.980
rbsC-2
Ribose ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.980
SACE_2987
ABC transporter protein, ATP binding component.
 
 0.979
rbsC-3
Putative D-ribose ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
0.940
SACE_3490
Sensor histidine kinase/response regulator.
  
 
 0.894
Your Current Organism:
Saccharopolyspora erythraea
NCBI taxonomy Id: 405948
Other names: S. erythraea NRRL 2338, Saccharopolyspora erythraea ATCC 11635, Saccharopolyspora erythraea DSM 40517, Saccharopolyspora erythraea JCM 4748, Saccharopolyspora erythraea NRRL 2338, Saccharopolyspora erythraea str. NRRL 2338, Saccharopolyspora erythraea strain NRRL 2338
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