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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SACE_0943Binding protein/LacI transcriptional regulator. (334 aa)    
Predicted Functional Partners:
rbsC
Ribose ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 0.993
rbsA
Ribose transport ATP-binding protein.
 
 0.992
SACE_1882
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 0.980
SACE_2988
ABC transporter integral membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 0.980
SACE_1881
ABC transporter protein, ATP binding component.
 
 0.979
SACE_2987
ABC transporter protein, ATP binding component.
 
 0.979
rbsA-2
ABC transporter protein, ATP binding component; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
 0.979
rbsC-2
Ribose ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 0.979
rbsC-3
Putative D-ribose ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
0.938
SACE_3490
Sensor histidine kinase/response regulator.
  
 
 0.903
Your Current Organism:
Saccharopolyspora erythraea
NCBI taxonomy Id: 405948
Other names: S. erythraea NRRL 2338, Saccharopolyspora erythraea ATCC 11635, Saccharopolyspora erythraea DSM 40517, Saccharopolyspora erythraea JCM 4748, Saccharopolyspora erythraea NRRL 2338, Saccharopolyspora erythraea str. NRRL 2338, Saccharopolyspora erythraea strain NRRL 2338
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