Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SACE_0948L-fucose isomerase, putative. (471 aa)    
Predicted Functional Partners:
SACE_6529
Carbohydrate kinase, FGGY.
 
 
 0.955
SACE_3934
Oxidoreductase.
     
  0.900
SACE_0949
Carbohydrate kinase, FGGY; Belongs to the FGGY kinase family.
 
  
 0.821
cscK
Ribokinase:carbohydrate kinase, PfkB.
    
  0.807
rkpK
UDP-glucose 6-dehydrogenase protein.
     
  0.800
SACE_3449
Gluconolactonase precursor.
     
  0.800
gnl
Gluconolactonase, putative.
     
  0.800
SACE_5566
UDP-glucose 6-dehydrogenase.
     
  0.800
eryA
Putative erythritol kinase protein.
 
  
 0.699
rbsR
Putative LacI-family transcriptional regulator.
 
   
 0.595
Your Current Organism:
Saccharopolyspora erythraea
NCBI taxonomy Id: 405948
Other names: S. erythraea NRRL 2338, Saccharopolyspora erythraea ATCC 11635, Saccharopolyspora erythraea DSM 40517, Saccharopolyspora erythraea JCM 4748, Saccharopolyspora erythraea NRRL 2338, Saccharopolyspora erythraea str. NRRL 2338, Saccharopolyspora erythraea strain NRRL 2338
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