Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
SACE_0992Oligopeptide/dipeptide ABC transporter, permease protein. (313 aa)    
Predicted Functional Partners:
dppC-1
Dipeptide transport system permease protein.
 
 
 0.976
SACE_0990
Oligopeptide/dipeptide ABC transporter, ATPase subunit; Belongs to the ABC transporter superfamily.
 
 
 0.973
SACE_0993
Probable peptide ABC transporter,substrate-binding protein.
 
 
 0.957
SACE_1276
Oligopeptide/dipeptide ABC transporter, permease protein.
 
 
 0.901
SACE_4552
Binding-protein-dependent transport systems membrane component.
 
 
 0.901
oppB
Oligopeptide ABC transporter, permease.
 
 
 0.901
SACE_6322
ABC transport protein membrane component.
 
 
 0.901
appCC
Oligopeptide ABC transporter (permease).
 
 
 0.900
SACE_2195
Putative peptide transport permease.
 
 
 0.900
SACE_5788
Putative binding-protein-dependent integral membrane transport protein.
 
 
 0.900
Your Current Organism:
Saccharopolyspora erythraea
NCBI taxonomy Id: 405948
Other names: S. erythraea NRRL 2338, Saccharopolyspora erythraea ATCC 11635, Saccharopolyspora erythraea DSM 40517, Saccharopolyspora erythraea JCM 4748, Saccharopolyspora erythraea NRRL 2338, Saccharopolyspora erythraea str. NRRL 2338, Saccharopolyspora erythraea strain NRRL 2338
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