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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SACE_1100PDZ/DHR/GLGF. (333 aa)    
Predicted Functional Partners:
SACE_1099
Hypothetical protein.
 
     0.793
SACE_1438
DNA polymerase III delta subunit.
 
     0.636
whiB2
Putative transcriptional regulator (WhiB family); Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.
  
   
 0.618
SACE_3843
Transcriptional regulator, MerR family.
  
     0.592
SACE_5730
ATP-dependent DNA helicase.
  
     0.558
whiB1
Putative transcriptional regulator (WhiB family); Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.
  
     0.539
whiB1-2
Putative transcriptional regulator (WhiB family); Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.
  
   
 0.534
whiA
Sporulation regulatory protein; Involved in cell division and chromosome segregation.
  
     0.520
SACE_1339
Membrane alanyl aminopeptidase.
  
     0.507
SACE_5830
Cell division initiation protein.
 
     0.496
Your Current Organism:
Saccharopolyspora erythraea
NCBI taxonomy Id: 405948
Other names: S. erythraea NRRL 2338, Saccharopolyspora erythraea ATCC 11635, Saccharopolyspora erythraea DSM 40517, Saccharopolyspora erythraea JCM 4748, Saccharopolyspora erythraea NRRL 2338, Saccharopolyspora erythraea str. NRRL 2338, Saccharopolyspora erythraea strain NRRL 2338
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.