Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
SACE_1663Exo-alpha-sialidase. (417 aa)    
Predicted Functional Partners:
hexA
beta-N-acetylhexosaminidase.
 
 0.939
nanH
Neuraminidase.
  
  
 
0.911
lacZ2
beta-D-galactosidase protein; Belongs to the glycosyl hydrolase 2 family.
    
 0.908
lacZ
Beta-galactosidase.
    
 0.908
agaB2
Putative alpha-galactosidase.
     
  0.900
agaB2-2
Putative alpha-galactosidase.
     
  0.900
SACE_6314
Twin-arginine translocation pathway signal; Glycosidase.
 
   
 0.596
SACE_1544
Secreted protein.
  
     0.566
dapAch1
Dihydrodipicolinate synthase protein; Belongs to the DapA family.
   
 0.555
SACE_0849
Peptidase S10, serine carboxypeptidase.
   
 0.546
Your Current Organism:
Saccharopolyspora erythraea
NCBI taxonomy Id: 405948
Other names: S. erythraea NRRL 2338, Saccharopolyspora erythraea ATCC 11635, Saccharopolyspora erythraea DSM 40517, Saccharopolyspora erythraea JCM 4748, Saccharopolyspora erythraea NRRL 2338, Saccharopolyspora erythraea str. NRRL 2338, Saccharopolyspora erythraea strain NRRL 2338
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