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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SACE_1665ABC sugar transporter, membrane subunit. (322 aa)    
Predicted Functional Partners:
SACE_1666
Sugar ABC transporter substrate-binding protein.
 
 0.997
SACE_1664
Maltose/maltodextrin transport system (permease).
 0.994
SACE_0454
Sugar ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.979
SACE_4159
Sugar ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.979
SACE_1048
Sugar ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.978
SACE_4258
Sugar ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.978
SACE_6264
Putative multiple sugar transport system permease protein.
 
 0.873
SACE_1892
Putative transmembrane sugar transport protein.
 
 0.872
SACE_0926
Binding-protein-dependent transport systems membrane component.
 
 0.871
SACE_7277
ABC transporter, permease protein.
 
 0.867
Your Current Organism:
Saccharopolyspora erythraea
NCBI taxonomy Id: 405948
Other names: S. erythraea NRRL 2338, Saccharopolyspora erythraea ATCC 11635, Saccharopolyspora erythraea DSM 40517, Saccharopolyspora erythraea JCM 4748, Saccharopolyspora erythraea NRRL 2338, Saccharopolyspora erythraea str. NRRL 2338, Saccharopolyspora erythraea strain NRRL 2338
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