STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SACE_1669Membrane proteins related to metalloendopeptidases. (283 aa)    
Predicted Functional Partners:
aglA
Alpha-glucosidase.
  
    0.519
pon1-2
Penicillin-binding protein 1.
  
   
 0.505
pon1
Penicillin binding protein (class A).
  
   
 0.489
SACE_1712
Hypothetical protein.
 
    0.474
pbp1A
Membrane carboxypeptidase (penicillin-binding protein).
  
   
 0.454
ftsX
Putative cell division membrane protein; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
  
 0.445
lepB
Signal peptidase I; Belongs to the peptidase S26 family.
 
  
 0.428
SACE_6065
Putative muramoyl-pentapeptide carboxypeptidase.
 
   
 0.415
Your Current Organism:
Saccharopolyspora erythraea
NCBI taxonomy Id: 405948
Other names: S. erythraea NRRL 2338, Saccharopolyspora erythraea ATCC 11635, Saccharopolyspora erythraea DSM 40517, Saccharopolyspora erythraea JCM 4748, Saccharopolyspora erythraea NRRL 2338, Saccharopolyspora erythraea str. NRRL 2338, Saccharopolyspora erythraea strain NRRL 2338
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