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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SACE_1995Putative flavoprotein monooxygenase acting on aromatic compound. (351 aa)    
Predicted Functional Partners:
SACE_1996
Probable transcriptional regulator, TetR family.
 
     0.615
SACE_1671
FAD-binding monooxygenase, PheA/TfdB family.
  
     0.549
SACE_6561
FAD-binding monooxygenase, PheA/TfdB family.
  
     0.513
SACE_1873
Monooxygenase, FAD-binding.
  
     0.485
SACE_5541
Hypothetical protein with pantoate--beta-alanine ligase and Hydroxymethylglutaryl-coenzyme A reductase domains.
   
  
 0.450
pksG
hydroxymethylglutaryl-CoA synthase.
   
  
 0.442
SACE_6149
Monooxygenase, FAD-binding.
  
     0.424
cypD
Bifunctional P-450:NADPH-P450 reductase 1.
 
 
 0.418
Your Current Organism:
Saccharopolyspora erythraea
NCBI taxonomy Id: 405948
Other names: S. erythraea NRRL 2338, Saccharopolyspora erythraea ATCC 11635, Saccharopolyspora erythraea DSM 40517, Saccharopolyspora erythraea JCM 4748, Saccharopolyspora erythraea NRRL 2338, Saccharopolyspora erythraea str. NRRL 2338, Saccharopolyspora erythraea strain NRRL 2338
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