Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SACE_2015Hypothetical protein. (103 aa)    
Predicted Functional Partners:
SACE_2014
Putative branched-chain amino acid permease.
 
   
 0.960
SACE_2013
Possible DNA-binding protein.
 
   
 0.908
SACE_3247
Transcriptional regulator, XRE family.
 
   
 0.597
SACE_4145
HTH transcriptional regulator, XRE family, cupin domain.
 
     0.504
SACE_5177
Hypothetical protein.
  
     0.451
SACE_6478
Protein of unknown function DUF574.
  
     0.449
SACE_3195
Hypothetical protein.
  
     0.438
SACE_4524
Hypothetical protein.
 
     0.410
Your Current Organism:
Saccharopolyspora erythraea
NCBI taxonomy Id: 405948
Other names: S. erythraea NRRL 2338, Saccharopolyspora erythraea ATCC 11635, Saccharopolyspora erythraea DSM 40517, Saccharopolyspora erythraea JCM 4748, Saccharopolyspora erythraea NRRL 2338, Saccharopolyspora erythraea str. NRRL 2338, Saccharopolyspora erythraea strain NRRL 2338
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.