Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SACE_2081 | SACE_6727 | SACE_2081 | SACE_6727 | Integral membrane protein. | Allantoinase. | 0.661 |
SACE_2081 | carA | SACE_2081 | SACE_2082 | Integral membrane protein. | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | 0.963 |
SACE_2081 | carB | SACE_2081 | SACE_2083 | Integral membrane protein. | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | 0.992 |
SACE_2081 | pydB | SACE_2081 | SACE_3419 | Integral membrane protein. | D-hydantoinase (dihydropyrimidinase) (DHPase). | 0.701 |
SACE_2081 | pyrB | SACE_2081 | SACE_2079 | Integral membrane protein. | Aspartate carbamoyltransferase catalytic chain; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.967 |
SACE_2081 | pyrC | SACE_2081 | SACE_2080 | Integral membrane protein. | Dihydroorotase, multifunctional complex type; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily. | 0.964 |
SACE_2081 | pyrD | SACE_2081 | SACE_2136 | Integral membrane protein. | Dihydroorotate dehydrogenase; Belongs to the dihydroorotate dehydrogenase family. | 0.844 |
SACE_2081 | pyrF | SACE_2081 | SACE_2084 | Integral membrane protein. | Orotidine-5prime-phosphate decarboxylase; Belongs to the OMP decarboxylase family. Type 2 subfamily. | 0.971 |
SACE_2081 | pyrR | SACE_2081 | SACE_2078 | Integral membrane protein. | Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant. | 0.964 |
SACE_6727 | SACE_2081 | SACE_6727 | SACE_2081 | Allantoinase. | Integral membrane protein. | 0.661 |
SACE_6727 | carA | SACE_6727 | SACE_2082 | Allantoinase. | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | 0.941 |
SACE_6727 | carB | SACE_6727 | SACE_2083 | Allantoinase. | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | 0.955 |
SACE_6727 | pyrB | SACE_6727 | SACE_2079 | Allantoinase. | Aspartate carbamoyltransferase catalytic chain; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.988 |
SACE_6727 | pyrD | SACE_6727 | SACE_2136 | Allantoinase. | Dihydroorotate dehydrogenase; Belongs to the dihydroorotate dehydrogenase family. | 0.810 |
SACE_6727 | pyrF | SACE_6727 | SACE_2084 | Allantoinase. | Orotidine-5prime-phosphate decarboxylase; Belongs to the OMP decarboxylase family. Type 2 subfamily. | 0.767 |
SACE_6727 | pyrR | SACE_6727 | SACE_2078 | Allantoinase. | Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant. | 0.838 |
carA | SACE_2081 | SACE_2082 | SACE_2081 | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | Integral membrane protein. | 0.963 |
carA | SACE_6727 | SACE_2082 | SACE_6727 | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | Allantoinase. | 0.941 |
carA | carB | SACE_2082 | SACE_2083 | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | 0.999 |
carA | purA | SACE_2082 | SACE_7173 | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.698 |
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