STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SACE_2167Regulatory protein, MarR. (164 aa)    
Predicted Functional Partners:
SACE_1080
Hypothetical protein.
  
     0.648
SACE_6358
Cell wall surface anchor family protein.
  
     0.607
SACE_0509
Hypothetical protein.
  
     0.598
SACE_6511
Hypothetical protein.
  
     0.576
SACE_6513
Hypothetical protein.
  
     0.567
SACE_7176
Predicted membrane protein.
  
     0.536
SACE_0855
Hypothetical protein.
  
   
 0.530
SACE_7160
Hypothetical protein.
  
     0.516
SACE_0488
Transcriptional regulator, SARP family.
  
     0.513
SACE_0833
Hypothetical protein.
  
     0.508
Your Current Organism:
Saccharopolyspora erythraea
NCBI taxonomy Id: 405948
Other names: S. erythraea NRRL 2338, Saccharopolyspora erythraea ATCC 11635, Saccharopolyspora erythraea DSM 40517, Saccharopolyspora erythraea JCM 4748, Saccharopolyspora erythraea NRRL 2338, Saccharopolyspora erythraea str. NRRL 2338, Saccharopolyspora erythraea strain NRRL 2338
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.