Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SACE_2178SUF system FeS assembly protein. (152 aa)    
Predicted Functional Partners:
csdB
Cysteine desulfurase / selenocysteine lyase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 
 
 0.992
SACE_2179
Predicted metal-sulfur cluster biosynthetic enzyme.
 
  
 0.990
SACE_2176
Putative ABC transporter ATP-binding protein.
 
  
 0.989
iscS
Cysteine desulfurase.
  
 0.982
SACE_6188
Putative pyridoxal-phosphate-dependent aminotransferase.
  
 0.982
sufB
Putative iron-regulated ABC-type transporter.
 
  
 0.964
sufD
FeS assembly protein.
 
  
 0.957
SACE_4122
Probable cysteine desulfurase.
 
 
 0.954
csd
Cysteine desulfurase.
 
 
 0.949
SACE_5825
Cysteine desulfurase.
 
 
 0.944
Your Current Organism:
Saccharopolyspora erythraea
NCBI taxonomy Id: 405948
Other names: S. erythraea NRRL 2338, Saccharopolyspora erythraea ATCC 11635, Saccharopolyspora erythraea DSM 40517, Saccharopolyspora erythraea JCM 4748, Saccharopolyspora erythraea NRRL 2338, Saccharopolyspora erythraea str. NRRL 2338, Saccharopolyspora erythraea strain NRRL 2338
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.