Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
SACE_2188Transcriptional regulator. (69 aa)    
Predicted Functional Partners:
SACE_5535
Putative sporulation and cell division regulator protein.
  
   
 0.689
SACE_2077
Putative transcriptional regulator (DNA-binding protein).
  
     0.628
ssgB
Regulator; Involved in sporulation-specific cell division. Required for early stages of sporulation. Important in the process of growth cessation prior to sporulation-specific cell division. Recruits cell division protein FtsZ to the future septum sites and tethers the contractile ring structure (Z ring) to the cytoplasmic membrane during sporulation. Stimulates polymerization and filament length of FtsZ in vitro (By similarity).
  
   
 0.601
SACE_2187
ABC transporter, ATP-binding protein.
  
    0.601
rsbW
Anti-sigma factor.
  
     0.591
SACE_7107
Hypothetical protein.
  
     0.591
SACE_6175
Amino acid-binding ACT.
  
     0.552
rsbW-2
Anti-sigma factor.
  
     0.547
SACE_6182
Methionine synthase, vitamin-B12 independent.
  
     0.529
SACE_7355
Possible membrane protein.
  
     0.515
Your Current Organism:
Saccharopolyspora erythraea
NCBI taxonomy Id: 405948
Other names: S. erythraea NRRL 2338, Saccharopolyspora erythraea ATCC 11635, Saccharopolyspora erythraea DSM 40517, Saccharopolyspora erythraea JCM 4748, Saccharopolyspora erythraea NRRL 2338, Saccharopolyspora erythraea str. NRRL 2338, Saccharopolyspora erythraea strain NRRL 2338
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