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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SACE_2196Putative ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. (532 aa)    
Predicted Functional Partners:
SACE_2195
Putative peptide transport permease.
  
 0.986
SACE_2194
Putative peptide transport system permease.
 
  
 0.961
SACE_2193
Putative peptide transport system secreted peptide binding protein.
 
  
 0.920
SACE_1276
Oligopeptide/dipeptide ABC transporter, permease protein.
  
 0.897
dppC-1
Dipeptide transport system permease protein.
  
 0.852
oppB
Oligopeptide ABC transporter, permease.
  
 0.840
SACE_4552
Binding-protein-dependent transport systems membrane component.
  
 0.834
appCC
Oligopeptide ABC transporter (permease).
  
 0.831
SACE_0846
ABC peptide transporter, permease component.
  
 0.803
SACE_2668
Putative transport system permease protein.
 
  
 0.803
Your Current Organism:
Saccharopolyspora erythraea
NCBI taxonomy Id: 405948
Other names: S. erythraea NRRL 2338, Saccharopolyspora erythraea ATCC 11635, Saccharopolyspora erythraea DSM 40517, Saccharopolyspora erythraea JCM 4748, Saccharopolyspora erythraea NRRL 2338, Saccharopolyspora erythraea str. NRRL 2338, Saccharopolyspora erythraea strain NRRL 2338
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.