Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SACE_2285FxsA cytoplasmic membrane protein. (202 aa)    
Predicted Functional Partners:
SACE_2286
Amidohydrolase 3.
  
  
 0.752
SACE_1540
Twin-arginine translocation pathway signal.
  
  
 0.537
SACE_1541
Twin-arginine translocation pathway signal.
  
  
 0.537
SACE_2939
Conserved hypothetical protein; Predicted metal-dependent hydrolase with the TIM-barrel fold.
  
  
 0.537
SACE_3486
Exoenzymes regulatory protein AepA precursor.
  
  
 0.537
SACE_3875
Probable metal-dependant glycoprotease.
  
  
 0.537
SACE_3923
Exoenzymes regulatory protein AepA precursor.
  
  
 0.537
SACE_4802
Amidohydrolase 3.
  
  
 0.537
SACE_6342
Amidohydrolase domain protein.
  
  
 0.537
SACE_2284
Hypothetical protein.
  
    0.524
Your Current Organism:
Saccharopolyspora erythraea
NCBI taxonomy Id: 405948
Other names: S. erythraea NRRL 2338, Saccharopolyspora erythraea ATCC 11635, Saccharopolyspora erythraea DSM 40517, Saccharopolyspora erythraea JCM 4748, Saccharopolyspora erythraea NRRL 2338, Saccharopolyspora erythraea str. NRRL 2338, Saccharopolyspora erythraea strain NRRL 2338
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