STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glpQ4Putative glycerophosphoryl diester phosphodiesterase. (243 aa)    
Predicted Functional Partners:
glpQ1
Glycerophosphoryl diester phosphodiesterase.
  
  
  0.957
SACE_3361
Glycerophosphoryl diester phosphodiesterase family.
  
  
  0.930
glpQ,
Glycerophosphoryl diester phosphodiesterase.
  
  
 
0.925
SACE_6355
Glycerophosphoryl diester phosphodiesterase.
  
  
 
0.911
glpQ
Glycerophosphoryl diester phosphodiesterase.
     
 0.903
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
 
  
 0.814
SACE_2291
Putative integral membrane protein.
 
     0.763
glpD-2
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
 
 0.701
SACE_2293
Hypothetical protein.
       0.590
SACE_0237
Glycerophosphoryl diester phosphodiesterase.
  
     0.504
Your Current Organism:
Saccharopolyspora erythraea
NCBI taxonomy Id: 405948
Other names: S. erythraea NRRL 2338, Saccharopolyspora erythraea ATCC 11635, Saccharopolyspora erythraea DSM 40517, Saccharopolyspora erythraea JCM 4748, Saccharopolyspora erythraea NRRL 2338, Saccharopolyspora erythraea str. NRRL 2338, Saccharopolyspora erythraea strain NRRL 2338
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