STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SACE_2425Universal stress protein. (291 aa)    
Predicted Functional Partners:
SACE_1988
Universal stress protein UspA.
  
     0.562
SACE_2424
Sodium/potassium-transporting ATPase, alpha subunit.
  
  
 0.548
lysS-2
lysyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family.
     
 0.537
clpC
Putative ATP-dependent Clp protease; Belongs to the ClpA/ClpB family.
     
 0.535
clpC-3
Putative ATP-dependent Clp protease.
     
 0.535
lysS
lysyl-tRNA synthetase class II; Belongs to the class-II aminoacyl-tRNA synthetase family.
     
 0.533
patB
Aminotransferase.
      
 0.526
mutY
A/G-specific adenine glycosylase.
      
 0.525
SACE_2427
Hypothetical protein.
 
  
 0.502
tig
Putative cell division trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.
      
 0.441
Your Current Organism:
Saccharopolyspora erythraea
NCBI taxonomy Id: 405948
Other names: S. erythraea NRRL 2338, Saccharopolyspora erythraea ATCC 11635, Saccharopolyspora erythraea DSM 40517, Saccharopolyspora erythraea JCM 4748, Saccharopolyspora erythraea NRRL 2338, Saccharopolyspora erythraea str. NRRL 2338, Saccharopolyspora erythraea strain NRRL 2338
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