STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ctpFCation-transporting ATPase. (904 aa)    
Predicted Functional Partners:
SACE_3156
Large transcriptional regulator.
   
 
 0.706
cypD
Bifunctional P-450:NADPH-P450 reductase 1.
    
 0.692
SACE_4388
Uncharacterized protein conserved in bacteria.
 
  
 0.690
SACE_2453
Uncharacterized protein conserved in bacteria.
 
  
 0.688
csbX-3
Alpha-ketoglutarate permease.
   
  
 0.677
uspA3-8
Universal stress protein family.
  
  
 0.591
SACE_2466
Possible universal stress protein.
  
  
 0.591
SACE_0303
Transcriptional regulator, TetR family.
      
 0.590
SACE_0304
Transcriptional regulator, MarR family with acetyltransferase activity.
      
 0.590
SACE_3790
Putative Mg2+ transporter-C (MgtC) family protein.
  
 
 0.588
Your Current Organism:
Saccharopolyspora erythraea
NCBI taxonomy Id: 405948
Other names: S. erythraea NRRL 2338, Saccharopolyspora erythraea ATCC 11635, Saccharopolyspora erythraea DSM 40517, Saccharopolyspora erythraea JCM 4748, Saccharopolyspora erythraea NRRL 2338, Saccharopolyspora erythraea str. NRRL 2338, Saccharopolyspora erythraea strain NRRL 2338
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.