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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SACE_2648LysR-family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (308 aa)    
Predicted Functional Partners:
SACE_1372
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.734
SACE_3991
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.722
SACE_3992
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.705
SACE_5404
LysR-family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.681
SACE_2647
4-aminobutyrate aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
     0.679
SACE_4609
Probable transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.643
SACE_5970
Putative LysR-family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.634
SACE_3081
LysR-family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.633
SACE_5710
Putative transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.563
SACE_2761
Hypothetical protein; Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.549
Your Current Organism:
Saccharopolyspora erythraea
NCBI taxonomy Id: 405948
Other names: S. erythraea NRRL 2338, Saccharopolyspora erythraea ATCC 11635, Saccharopolyspora erythraea DSM 40517, Saccharopolyspora erythraea JCM 4748, Saccharopolyspora erythraea NRRL 2338, Saccharopolyspora erythraea str. NRRL 2338, Saccharopolyspora erythraea strain NRRL 2338
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