Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SACE_2097 | SACE_2721 | SACE_2097 | SACE_2721 | Hypothetical protein. | Hypothetical protein. | 0.564 |
SACE_2097 | SACE_6494 | SACE_2097 | SACE_6494 | Hypothetical protein. | Cell wall surface anchor family protein. | 0.706 |
SACE_2097 | SACE_6921 | SACE_2097 | SACE_6921 | Hypothetical protein. | Hypothetical protein. | 0.710 |
SACE_2721 | SACE_2097 | SACE_2721 | SACE_2097 | Hypothetical protein. | Hypothetical protein. | 0.564 |
SACE_2721 | SACE_4195 | SACE_2721 | SACE_4195 | Hypothetical protein. | Putative anti-sigma regulatory factor,serine/threonine protein kinase. | 0.698 |
SACE_2721 | SACE_4198 | SACE_2721 | SACE_4198 | Hypothetical protein. | Putative regulatory protein. | 0.605 |
SACE_2721 | SACE_6494 | SACE_2721 | SACE_6494 | Hypothetical protein. | Cell wall surface anchor family protein. | 0.604 |
SACE_2721 | SACE_6866 | SACE_2721 | SACE_6866 | Hypothetical protein. | Putative ABC transport system ATP-binding protein. | 0.580 |
SACE_2721 | SACE_6921 | SACE_2721 | SACE_6921 | Hypothetical protein. | Hypothetical protein. | 0.674 |
SACE_2721 | prpC3 | SACE_2721 | SACE_4404 | Hypothetical protein. | Magnesium or manganese-dependent protein phosphatase. | 0.605 |
SACE_2721 | prsR | SACE_2721 | SACE_4200 | Hypothetical protein. | Regulator of sigma factor. | 0.758 |
SACE_2721 | rsbW | SACE_2721 | SACE_4196 | Hypothetical protein. | Anti-sigma factor. | 0.619 |
SACE_2721 | rsbW-2 | SACE_2721 | SACE_5685 | Hypothetical protein. | Anti-sigma factor. | 0.619 |
SACE_4195 | SACE_2721 | SACE_4195 | SACE_2721 | Putative anti-sigma regulatory factor,serine/threonine protein kinase. | Hypothetical protein. | 0.698 |
SACE_4195 | SACE_4198 | SACE_4195 | SACE_4198 | Putative anti-sigma regulatory factor,serine/threonine protein kinase. | Putative regulatory protein. | 0.780 |
SACE_4195 | prpC3 | SACE_4195 | SACE_4404 | Putative anti-sigma regulatory factor,serine/threonine protein kinase. | Magnesium or manganese-dependent protein phosphatase. | 0.780 |
SACE_4195 | rsbW | SACE_4195 | SACE_4196 | Putative anti-sigma regulatory factor,serine/threonine protein kinase. | Anti-sigma factor. | 0.539 |
SACE_4198 | SACE_2721 | SACE_4198 | SACE_2721 | Putative regulatory protein. | Hypothetical protein. | 0.605 |
SACE_4198 | SACE_4195 | SACE_4198 | SACE_4195 | Putative regulatory protein. | Putative anti-sigma regulatory factor,serine/threonine protein kinase. | 0.780 |
SACE_4198 | prsR | SACE_4198 | SACE_4200 | Putative regulatory protein. | Regulator of sigma factor. | 0.899 |
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