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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SACE_2910Hypothetical protein; 77 Permeases of the major facilitator superfamily. (259 aa)    
Predicted Functional Partners:
SACE_6972
Putative MFS sugar transporter protein.
 
     0.831
SACE_6079
Putative multidrug resistance efflux protein.
  
     0.768
SACE_2763
Probable multidrug efflux transport protein.
  
     0.767
SACE_2229
Probable multidrug resistance transporter, MFS superfamily.
 
     0.763
SACE_0785
Multidrug transporter, Dha2 family of MFS superfamily.
  
    0.761
SACE_7202
Integral membrane transport protein.
  
     0.744
SACE_7323
Drug resistance transporter, EmrB/QacA family.
  
     0.739
SACE_3757
Multidrug resistance transporter, MFS superfamily.
  
     0.723
SACE_0390
Multidrug transporter, MFS superfamily; Belongs to the major facilitator superfamily.
  
     0.722
lmrB
Lincomycin resistance protein; Belongs to the major facilitator superfamily.
  
     0.664
Your Current Organism:
Saccharopolyspora erythraea
NCBI taxonomy Id: 405948
Other names: S. erythraea NRRL 2338, Saccharopolyspora erythraea ATCC 11635, Saccharopolyspora erythraea DSM 40517, Saccharopolyspora erythraea JCM 4748, Saccharopolyspora erythraea NRRL 2338, Saccharopolyspora erythraea str. NRRL 2338, Saccharopolyspora erythraea strain NRRL 2338
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