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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cysK3Putative cysteine synthase. (328 aa)    
Predicted Functional Partners:
arcB4
Putative ornithine cyclodeaminase.
 
 
 0.978
arcB4-2
Putative ornithine cyclodeaminase.
 
 
 0.977
cysK3-2
Putative cysteine synthase.
  
  
 
0.901
cysK
Cysteine synthase A.
  
     0.766
cysE
Serine O-acetyltransferase.
 
 
 0.759
metB
Cystathionine gamma-synthase.
 
 
 0.674
megL
Methionine gamma-lyase.
 
 
 0.672
SACE_6136
Probable cystathionine/methionine gamma-synthase/lyase.
 
 
 0.668
cysS
Cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.637
cypD
Bifunctional P-450:NADPH-P450 reductase 1.
 
 
 0.594
Your Current Organism:
Saccharopolyspora erythraea
NCBI taxonomy Id: 405948
Other names: S. erythraea NRRL 2338, Saccharopolyspora erythraea ATCC 11635, Saccharopolyspora erythraea DSM 40517, Saccharopolyspora erythraea JCM 4748, Saccharopolyspora erythraea NRRL 2338, Saccharopolyspora erythraea str. NRRL 2338, Saccharopolyspora erythraea strain NRRL 2338
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