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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SACE_3125Hypothetical protein. (295 aa)    
Predicted Functional Partners:
SACE_3240
Hypothetical conserved protein.
 
     0.723
fadE13
acyl-CoA dehydrogenase.
 
     0.663
SACE_3244
TetR-family transcriptional regulator.
 
     0.652
SACE_3124
Hypothetical protein.
       0.539
SACE_0596
Hypothetical protein; 77 Permeases of the major facilitator superfamily.
  
     0.535
pup1
Hypothetical protein; Protein modifier that is covalently attached to lysine residues of substrate proteins, thereby targeting them for proteasomal degradation. The tagging system is termed pupylation.
  
     0.498
fadE12
acyl-CoA dehydrogenase.
 
     0.498
SACE_3446
Putative transcriptional regulator of the TetR family.
 
     0.464
SACE_7379
Possible glycoprotein.
  
     0.445
SACE_3242
Putative acetyl/propionyl-CoA carboxylase alpha subunit.
 
     0.439
Your Current Organism:
Saccharopolyspora erythraea
NCBI taxonomy Id: 405948
Other names: S. erythraea NRRL 2338, Saccharopolyspora erythraea ATCC 11635, Saccharopolyspora erythraea DSM 40517, Saccharopolyspora erythraea JCM 4748, Saccharopolyspora erythraea NRRL 2338, Saccharopolyspora erythraea str. NRRL 2338, Saccharopolyspora erythraea strain NRRL 2338
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.