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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fadE10Putative acyl-CoA dehydrogenase. (379 aa)    
Predicted Functional Partners:
fixB
Electron transfer flavoprotein, alpha subunit.
 
 0.841
fixA
Electron transfer flavoprotein, beta subunit.
 
 
 0.836
SACE_3134
NADH:flavin oxidoreductase/NADH oxidase.
 
 
 0.718
SACE_1823
Probable fatty acid oxidation complex alpha subunit.
  
 0.701
SACE_5040
3-hydroxyacyl-CoA dehydrogenase, NAD-binding.
  
 0.701
fadB
Putative 3-hydroxyacyl-CoA dehydrogenase.
  
 0.701
fadE21-2
Putative acyl-CoA dehydrogenase.
  
     0.645
SACE_4690
Hypothetical protein; Acyl-CoA dehydrogenases.
  
     0.604
abmC
Putative enoyl-CoA hydratase/isomerase.
 
 0.551
SACE_3136
Putative endoribonuclease, translation initiation inhibitor.
 
 
   0.539
Your Current Organism:
Saccharopolyspora erythraea
NCBI taxonomy Id: 405948
Other names: S. erythraea NRRL 2338, Saccharopolyspora erythraea ATCC 11635, Saccharopolyspora erythraea DSM 40517, Saccharopolyspora erythraea JCM 4748, Saccharopolyspora erythraea NRRL 2338, Saccharopolyspora erythraea str. NRRL 2338, Saccharopolyspora erythraea strain NRRL 2338
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.