Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SACE_3153AMP-dependent synthetase and ligase. (571 aa)    
Predicted Functional Partners:
SACE_3400
acetyl/propionyl-CoA carboxylase alpha subunit.
  
 
 0.821
SACE_6509
acetyl/propionyl-CoA carboxylase alpha subunit.
  
 
 0.821
accC3
Biotin carboxylase.
  
 
 0.785
fadD
acyl-CoA synthase.
  
  
 
0.716
SACE_0603
Hypothetical protein; Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
 
 
0.709
SACE_1694
Putative long-chain fatty acid ligase.
 
 
0.699
SACE_6950
Putative fatty-acid--CoA ligase.
  
  
 
0.695
SACE_3409
AMP-dependent Acyl-CoA synthetase and ligase.
  
  
 
0.690
SACE_5343
AMP-dependent synthetase and ligase.
 
 
0.683
SACE_5393
long-chain-fatty-acid--CoA ligase.
  
  
 
0.680
Your Current Organism:
Saccharopolyspora erythraea
NCBI taxonomy Id: 405948
Other names: S. erythraea NRRL 2338, Saccharopolyspora erythraea ATCC 11635, Saccharopolyspora erythraea DSM 40517, Saccharopolyspora erythraea JCM 4748, Saccharopolyspora erythraea NRRL 2338, Saccharopolyspora erythraea str. NRRL 2338, Saccharopolyspora erythraea strain NRRL 2338
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