Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
accC3Biotin carboxylase. (1080 aa)    
Predicted Functional Partners:
SACE_4237
Probable acetyl/propionyl-CoA carboxylase alpha subunit.
 
0.992
SACE_4473
Hypothetical protein; Biotin carboxylase.
 
 0.986
SACE_3242
Putative acetyl/propionyl-CoA carboxylase alpha subunit.
 
0.961
SACE_7038
Putative acetyl-CoA carboxylase alpha subunit.
 
0.961
SACE_3400
acetyl/propionyl-CoA carboxylase alpha subunit.
 
0.959
SACE_6509
acetyl/propionyl-CoA carboxylase alpha subunit.
 
0.959
SACE_6501
biotin--[acetyl-CoA-carboxylase] ligase.
 
 
 0.955
SACE_0028
acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
  
 0.953
accD3
Putative acetyl CoA carboxylase beta subunit.
 
 
0.882
fumB
Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
  
  
 0.849
Your Current Organism:
Saccharopolyspora erythraea
NCBI taxonomy Id: 405948
Other names: S. erythraea NRRL 2338, Saccharopolyspora erythraea ATCC 11635, Saccharopolyspora erythraea DSM 40517, Saccharopolyspora erythraea JCM 4748, Saccharopolyspora erythraea NRRL 2338, Saccharopolyspora erythraea str. NRRL 2338, Saccharopolyspora erythraea strain NRRL 2338
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